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This web page is Online Supplementary Information for
UNRAVELING DYNAMIC ACTIVITIES OF AUTOCRINE PATHWAYS THAT CONTROL DRUG-RESPONSE TRANSCRIPTOME NETWORKS
by
YOSHINORI TAMADA, HIROMITSU ARAKI, SEIYA IMOTO, MASAO NAGASAKI, ATSUSHI, DOI, YUKIKO NAKANISHI, YUKI TOMIYASU, KAORI YASUDA, BEN DUNMORE, DEBORAH SANDERS, SALLY HUMPHREYS, CRISTIN PRINT, D. STEPHEN CHARNOCK-JONES, KOUSUKE TASHIRO, SATORU KUHARA, and SATORU MIYANO,
Pacific Symposium on Biocomputing 14, 251-263, 2009 (PSB 2009).
Contact: Yoshinori Tamada <tamadasatpimsadotsu-tokyoadotmacsdotsjp>a(replace "at" with "@", "dot" with ".")
The original paper can be downloaded
from PSB Online.
Go back to my www site home page.
The file includes all the pairs of Entrez Gene IDs representing protein-protein interactions extracted from Genome Network Platform (http://genomenetwork.nig.ac.jp/index_e.html).
The gzipped CSML files can be viewed with Cell Illustrator 4.0 or later. You can obtain one-month free license for online version CIO 4.0 and use it on the CI Online web page. The CSML 1.9 versions of the files are also available and can be viewed with Cell Illustrator 3.0.
Each line corresponds to one pathway. The columns are p-value, first node (ligand or receptor), intermediate proteins, ..., the last node.
Each figure for Gt is put on the separate page.