My Name
Tetsuo Shibuya
Degrees
Ph.D. of Science, University of Tokyo, December 2002.
M.S. of Science, University of Tokyo, March 1997.
B.S. of Science, University of Tokyo, March 1995.
Education
Department of Information Science, Graduate School of Science, The University
of Tokyo (April 1995 - March 1997)
Department of Information Science, Faculty of Science, The University of
Tokyo (April 1993 - March 1995)
Faculty of Arts and Science, The University of Tokyo (April 1991 - March
1993)
Nada Senior High School (April 1988 - March 1991)
Nada Junior High School (April 1985 - March 1988)
Positions
Professor, Division of Medical Data Informatics, Human Genome Center, The
University of Tokyo. (March 2020 -)
Associate Professor, Laboratory of Sequence Analysis, Human Genome Center,
The University of Tokyo. (March 2009 - February 2020)
Senior Assistant Professor, Laboratory of Sequence Analysis, Human Genome
Center, The University of Tokyo. (February 2004 -March 2009)
Researcher, IBM Tokyo Research Laboratory (April 1997 - January 2004)
Visiting Positions
Visiting Professor, Gakushuin University, (April 2022 - March 2025)
Visiting Associate Professor, Institute of Chemical Research, Kyoto University.
(April 2013-March 2014)
Visiting Researcher, Institut National de Recherche en Informatique et
en Automatique (INRIA), Lille, France, (2008/2)
Visiting Researcher, RIKEN Genomic Sciences Center (April 2001 - March
2008)
Assignment, IBM Watson Research Center, NY, USA(July 2000 - October 2000)
Awards
IEEE Outstanding Paper Award, The 21st IEEE International Conference on
Trust, Security and Privacy in Computing and Communications (IEEE TrustCom
2022), December 9-11, 2022.
Science and Technology Award, Minister of Eduation, Culture, Sports, Science
and Technology, April 14, 2021.
SIGBIO Contribution Award, IPSJ, December 18, 2014.
Microsoft Research Japan New Faculty Award, November 15, 2011.
Funai Science Award, May 28, 2011.
Best Paper Award, The 13th Annual International Conference on Research
in Computational Molecular Biology (RECOMB 2009), May 21, 2009.
IPSJ Yamashita SIG Research Award, March 11, 2009.
Awards to my co-authors
Best Oral Presentation Award, The 4th International Conference on Computing
and Big Data, 2021. (given to Mr. Arda Akdemir)
IPSJ SIGBIO Good Presentation Awad, IPSJ, 2021 (given to Mr. Akito Yamamoto)
IPSJ Yamashita SIG Research Award, 2017. (given to Mr. Yohichi Sasaki.)
IPSJ Student Presentation Award, IPSJ, 2017. (given to Mr. Yohichi Sasak)
SIGBIO Best Student Presentation Award, SIGBIO, IPSJ, 2015.(given to Mr. Yohichi Sasaki).
SAR Presentation Award, 40th Symposium on Structure-Activity Relationships, The Pharmaceutical Society of Japan, November 30, 2013. (given to Dr. Genki Terashi, who presented our paper.)
Others
Senior Member, Information Processing Society of Japan, 2017.
Conference Program Committee Chair, etc.
Program Chair, The 11th International Conference on Biomedical and Bioinformatics
Engineering (ICBBE 2024), November 8-11, 2024, Kyoto, Japan.
Program co-Chair, The 14th International Conference on Biomedical Engineering
and Technology (ICBET 2024), June 14-17, 2024, Seoul, South Korea,
Local co-Chair, The 9th International Conference on Similarity Search and
Applications (SISAP 2016), 2016
Program co-Chair, The 25th Genome Informatics Workshop (GIW 2014), 2014.
Program co-Chair, The 7th IAPR Conference on Pattern Recognition in Bioinformatics
(PRIB 2012), 2012.
Editor-in-Chief, etc.
Editor-in-Chief, IPSJ Transactions on Bioinformatics (April 2010-Mar 2012)
Managing Editor, IPSJ Transactions on Bioinformatics (April 2007-Mar 2010,
April 2016-)
Chair. IPSJ SIGBIO (April 2011 - March 2013)
Conference Program Committee Member
Program Committee Member, the 17th International Conference on Similarity
Search and Applications, (SISAP 2024), 2024.
Program Committee Member, The 2023 IEEE Interntaional Conference on Bioinformatics
and Biomedicine (BIBM 2023), 2023.
Program Committee Member, the 16th International Conference on Similarity
Search and Applications, (SISAP 2023), 2023.
Program Committee Member, International Conference on Genome Informatics
(GIW 2022), 2022.
Program Committee Member, The 14th International Conference on Similarity
Search and Applications (SISAP 2021), 2021.
Program Committee Member, The 16th International Conference on Bioinformatics
(InCoB 2020), 2020.
Program Committee Member, The 13th International Conference on Similarity
Search and Applications (SISAP 2020), 2020.
Program Committee Member, International Conference on Genome Informatics
(GIW 2019), 2019.
Program Committee Member, The 12th International Conference on Similarity
Search and Applications (SISAP 2019), 2019.
Program Committee Member, International Conference on Genome Informatics
(GIW 2018), 2018.
Program Committee Member, The 29th International Symposium on Algorithms
and Computation (ISAAC 2018), 2018.
Program Committee Member, The 11th International Conference on Similarity
Search and Applications (SISAP 2018), 2018.
Program Committee Member, IEEE The 18th International Conference on BioInformatics
and BioEngineering (BIBE 2018), 2018.
Program Committee Member, International Conference on Genome Informatics
(GIW/BIOINFO 2017), 2017.
Program Committee Member, The 16th International Conference on Bioinformatics
(InCoB 2017), 2017.
Program Committee Member, The 10th International Conference on Similarity
Search and Applications (SISAP 2017), 2017.
Program Committee Member, The 24th Annual Conference on Intelligent Systems
for Molecular Biology (ISMB 2016), 2016.
Program Committee Member, IEEE The 16th International Conference on BioInformatics
and BioEngineering (BIBE 2016), 2016.
Program Committee Member, The 27th International Conference on Genome Informatics
(GIW 2016), 2016.
Program Committee Member, The 15th International Conference on Bioinformatics
(InCoB 2016), 2016.
Program Committee Member, The 13th International Colloquium on Theoretical
Aspects of Computing (ICTAC 2016), 2016
Program Committee Member, The 23rd Annual Conference on Intelligent Systems
for Molecular Biology and the 14th European Conference on Computational
Biology (ISMB/ECCB 2015), 2015.
Program Committee Member, The 26th International Conference on Genome Informatics
Workshop and the 10th International Conference on Bioinformatics Joint
Conference(GIW/InCoB 2015), 2015.
Program Committee Member, IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2015), 2015.
Program Committee Member, Genomic Medicine 2015, 2015.
Program Committee Member IEEE International Conference on Bioinformatics
and Biomedicine (BIBM 2014), 2014.
Program Committee Member, The 25th International Symposium on Algorithms
and Computation (ISAAC 2014), 2014.
Program Committee Member, The 13th International Conference on Bioinformatics
(InCoB 2014), 2014.
Program Committee Member, The 24th International Conference on Genome Informatics
(GIW 2013), 2013.
Program Committee Member, Joint Conference on Informatics in Biology, Medicine
and Pharmacology, 2013.
Program Committee Member IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2013), 2013.
Program Committee Member, The 12th International Conference on Bioinformatics
(InCoB 2013), 2013.
Program Committee Member, The 2nd annual IEEE International Conference
on Healthcare Informatics, Imaging and Systems Biology (HISB 2012), 2012.
Program Committee Member, Joint Conference on Informatics in Biology, Medicine
and Pharmacology, 2012.
Program Committee Member, The 11th International Conference on Bioinformatics
(InCoB 2012), 2012.
Program Committee Member IEEE International Conference on Bioinformatics
and Biomedicine (BIBM 2012), 2012.
Program Committee Member, ACM Conference on Bioinformatics, Computational
Biology and Biomedicine (ACM BCB), 2011.
Program Committee Member IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2011), 2011.
Program Committee Member, IEEE Conference on Healthcare Informatics, Imaging
and Systems Bilogy (HISB 2011), 2011.
Program Committee Member, The 10th International Conference on Bioinformatics
(InCoB 2011), 2011.
Program Committee Member, The 6th International Conference on Future Information
Technology (FutureTech 2011), 2011.
Program Committee Member, The 5th Workshop on Algorithms and Computation
(WALCOM 2011), 2011.
Program Committee Member, The 22nd International Conference on Genome Informatics (GIW 2011), 2011.
Program Committee Member, The 21h International Conference on Genome Informatics
(GIW 2010), 2010.
Program Committee Member, The 9th International Conference on Bioinformatics
(InCoB 2010), 2010.
Program Committee Member, The 5th International Conference on Future Information
Technology (FutureTech 2010), 2010.
Program Committee Member, The 20h International Conference on Genome Informatics
(GIW 2009), 2009
Program Committee Member, The 4th Indian International Conference on Artificial Intelligence (IICAI-09) , 2009.
Program Committee Member, The 19h International Conference on Genome Informatics
(GIW 2008), 2008.
Program Committee Member, The 2007 Annual Conference of Japanese Society
for Bioinformatics, 2007.
Program Committee Member, the 2nd VLDB bioinformatics Conference, 2007.
Program Committee Member, The 3rd Indian International Conference on Artificial Intelligence (IICAI-07) , 2007.
Program Committee Member, The 18h International Conference on Genome Informatics
(GIW 2007), 19-21 December, 2007.
Program Committee Member, The 17h International Conference on Genome Informatics
(GIW 2006), 19-21 December, 2006.
Program Committee Member, Workshop of Data Mining in Bioinformatics, 2006.
Program Committee Member, The 16h International Conference on Genome Informatics
(GIW 2005), 19-21 December, 2005.
Program Committee Member, Workshop on Algorithms and Computation 2005.
Scientific Committee Member, The IADIS Virtual Multi Conference on Computer Science and Information Systems (MCCIS 2005), 2005.
Program Committee Member, The 15h International Conference on Genome Informatics
(GIW 2004), 13-15 December, 2004.
Editorial Member, etc.
Algorithms, Editorial Board Member (2021-)
Evolutionary Bioinformatics, Guest Editor (2016)
Editor, Database Transaction (April 2015 - March 2019)
Auditor, JSBi (April 2013 - March 2014)
Editor, Dataset Papers in Bioinformatics (March 2012-)
Councilor, JSBi (April 2011 - March 2013, April 2014 - March 2016)
Editor, IPSJ Journal of Information Processing (June 2009-April 2013)
Program Member, IPSJ SIGAL (April 2007-March 2011)
Manager, JSBi (April 2004 - March 2013)
Manager, JSBi Summer School (2007)
Editor, IEICE Journal (November 15, 2005 -April 2007)
Program Member, IEICE COMP (May 2000 - March 2006)
Editor, IPSJ Transactions on Bioinformatics (April 2005-March 2007, April
2012-March 2016)
Board Member, IPSJ SIGBIO (April 2007 - March 2011)
Editor, IPSJ Journal (May 2005-April 2007)
Program Member. IPSJ SIGBIO (April 2005 - March 2007)
Board Member, IPSJ SIGAL (April 2004 - March 2006)
Program Member, IPSJ SIGAL (April 2002 - March 2004)
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