DNAのワークフロー

digraph G{ node [shape=diamond] fq2bam fastqc fastqc_list sv snv cnv msi hrd hyper annovar qc genomon multiqc check virus; node [shape=box,style=rounded] fastq bam vcf_snv vcf_sv; fastq [label="fastq"]; fastqc [label="FastQC"]; fastqc_list [label="FastQC_list"]; bam [label="bam"]; fq2bam [label="PARABRICKS FQ2BAM"]; sv [label="SV"]; snv [label="SNV"]; msi [label="MSI"]; cnv [label="CNV"]; hrd [label="HRD"]; hyper [label="hyperClust"]; annovar [label="Annovar"]; genomon [label="Genomon"]; check [label="NGSCheckMate"]; virus [label="Virus"]; multiqc [label="MultiQC"]; qc [label="QC"]; vcf_snv [label="vcf"]; vcf_sv [label="vcf"]; fastq->fastqc->fastqc_list; fastqc->multiqc; fastq->fq2bam->bam; bam->snv; bam->genomon; bam->qc->multiqc; snv->vcf_snv; vcf_snv->hrd; vcf_snv->hyper; vcf_snv->annovar; bam->sv->vcf_sv->hrd; bam->cnv->hrd; bam->cnv->hyper; bam->msi; bam->check; bam->virus; }